Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNLLLLALPVLASRAYAAPAPGQALQRVGIVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYY---QDQLLPVSRIIVHPQFYT--AQIGADIALLELEEPVNVSSHVHTVTLPPASE---TFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPKKP |
| 2WPH Chain:S ((1-234)) | ------------------------------VVGGEDAKPGQFPWQVVLNGKV---DAFCGGSIVNEKWIVTAAHCVE----TGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGS-GYVSGWGRVFHKGR--SALVLQYLRVPLVDRATCLRSTKF---------TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182151 for 1936 contacts (-94.1/contact) +
2D Compatibility (PS) -24070 + (NN) -3921 + (LL) 2720
1D Compatibility (HY) -17200 + (ID) 4300
Total energy: -228922.0 ( -118.24 by residue)
QMean score : 0.543
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