Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSKHQCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSDSFASHPN-YPYSDEY |
3H7R Chain:A ((26-320)) | -----RFFELNTGAKLPCVGLGTY-------AMVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESL--MPT-PEML--TKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVAR--VTPAVNQVECHPVWQQQGLHELCKSKGVHLSGYSPLGSQS-KGEV---RLKVLQNPIVTEVAEKLGKTTAQVALRWGLQTGHSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQE-KFCRATEFA-HETHGFY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163752 for 2518 contacts (-65.0/contact) +
2D Compatibility (PS) -32068 + (NN) -22366 + (LL) 1028
1D Compatibility (HY) -22800 + (ID) 6000
Total energy: -245958.0 ( -97.68 by residue)
QMean score : 0.665
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