Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASHLELNNGTKMPTLGLGTWKSP-PGQVTEAVKVAIDMGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDTDFVDTWTAMEQLVDEGLVKAIGVSNFNPLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIEYCHCKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKEIAAKYNKTTAQVLIRFPIQRNLVVIPKSVTPARIAENFKVFDFELSNEDMATLLSYNRNWRVCALMSCAKHKDYPFHAEV |
4GIE Chain:A ((14-279)) | --NCVTLHNSVRMPQLGLGVWRAQDGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES----GVPREEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK--------------------KFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCK--IRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGSGE-------EAGILKNHVLGEIAKKHNKSPAQVVIRWDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRIGA---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170037 for 2276 contacts (-74.7/contact) +
2D Compatibility (PS) -28769 + (NN) -13577 + (LL) 2352
1D Compatibility (HY) -22400 + (ID) 5600
Total energy: -238031.0 ( -104.58 by residue)
QMean score : 0.659
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