Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLSKFGSLAHLCGPGGVDHLPVKILQPAKADKESFEKAYQVGAVLGSGGFGTVYAGSRIADGLPVAVKHVVKERVTEWGSLGGATVPLEVVLLRKVGAAGGAR--GVIRLLDWFERPDGFLLVLERPEPAQDLFDFITERGALDEPLARRFFAQVLAAVRHCHSCGVVHRDIKDENLLVDLRSGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSATVWSLGVLLYDMVCGDIPFEQD------EEILRGRLLFRRRVSPECQQLIRWCLSLRPSERPSLDQIAAHPWMLGADGGVPESCDLRLCTLDPDDVASTTSSSESL |
3LAU Chain:A ((10-268)) | ---------------------------------------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--------VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYA-PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADF-----------------LDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW-ITANSSKPS------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161962 for 1802 contacts (-89.9/contact) +
2D Compatibility (PS) -25247 + (NN) -14480 + (LL) 4032
1D Compatibility (HY) -20800 + (ID) 4050
Total energy: -222507.0 ( -123.48 by residue)
QMean score : 0.467
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