Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQSKGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME-LMDTSL-DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPY-MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLILGD |
| 4ZJI Chain:D ((29-277)) | ---------------------------------------------------------KIGQGASGTVYTAMDVATGQEVAIKQM--N-----KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGF-AQIT---SKRSTMVGTPYWMAPEVV----TRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEAT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114247 for 1765 contacts (-64.7/contact) +
2D Compatibility (PS) -25140 + (NN) -12765 + (LL) 3636
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -169966.0 ( -96.30 by residue)
QMean score : 0.393
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