Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALK--GKDILGSAQTGTGKTLAFAIPLIAKLLGEPNASTALVIVPTRELAQQ---VTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQR----RPRIVIGTPGRIIDHIERKTLIT-NNVSTLVLDEVDRMF-DMGFGIQIEGIMKYLPKMRQNLMFSATLPGDIVKLAEKYSNQPERVSVENEATTSVKIKQEIIYASESEKYGKLVTQLYQRKGSIIVFVRTKQRADQLAYKLRKDNHSALAIHGDLKQRKRKRVINSFRRGHNQIMVATDVASRGLDIPHIQHVINYDAPESQANYIHRTGRTARAGAEGYALSFITSQDKKRLPTLTDKKGELNFDCNVQFKKCSSKKVSRRPSALKIKYGRKKTSTFKKKSTVLEKIY |
| 3FMO Chain:B ((93-300)) | --SFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPE---LKLAYAVRG-------NKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145401 for 1595 contacts (-91.2/contact) +
2D Compatibility (PS) -21368 + (NN) -11076 + (LL) 14912
1D Compatibility (HY) -16400 + (ID) 3450
Total energy: -182783.0 ( -114.60 by residue)
QMean score : 0.642
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