Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK |
| 1SU5 Chain:A ((3-243)) | -RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDF----ARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQT-KAIADNVKDWSK-VVLAYEPVWAIGTGNPNTPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPE-FVDII---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77712 for 2086 contacts (-37.3/contact) +
2D Compatibility (PS) -26196 + (NN) -12805 + (LL) 732
1D Compatibility (HY) -15200 + (ID) 5250
Total energy: -136431.0 ( -65.40 by residue)
QMean score : 0.604
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