Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
3RUZ Chain:A ((7-135))
-------------------------------------------------------------------------------------LHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEFN------EKYGPEASAFTKKMVENAKKIEKEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
3RUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49010 for 1017 contacts (-48.2/contact) +
2D Compatibility (PS) -13780 + (NN) -3300 + (LL) 6020
1D Compatibility (HY) -15200 + (ID) 6150
Total energy: -81420.0 ( -80.06 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_3RUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RUZ-query.scw
PDB file :
Tito_Scwrl_3RUZ.pdb
: