Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
3TLX Chain:A ((33-242))
---IFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQAEDLNKLLQKNQTKLDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEPLIQREDDNEDVLKKRLTVFKSETSPLISYYKNKNLLINLDATQPANDLEKKISQHID--
General information:
TITO was launched using:
RESULT:
Template:
3TLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52450 for 1588 contacts (-33.0/contact) +
2D Compatibility (PS) -22572 + (NN) -11616 + (LL) 552
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -106586.0 ( -67.12 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_3TLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TLX-query.scw
PDB file :
Tito_Scwrl_3TLX.pdb
: