Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLEVKHVKKVYGKGLNATTALNQMNLSVGAGEFVAIMGESGSGKSTLLNLIASFDGLTEGDIIVDGAHLNNMKNKSKALYRQQMVGFVFQDFNLLPTMTNKENIMMPLILAGAKRKDIEQRVHQLAVQLHLEGFLNKYPS-----------EISGGQKQRIAIARALVTKPTILLADEPTGALDSKTSKALMMLFQEIHQLEQTILMVTHSNIDASYAERVIFIKDGRLYHEIYRGEESQLAFQQRITDSLALVNGGSVNI
2ONJ Chain:B ((340-566))
--IDIDHVSFQYND--NEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDG---HNIKDFLTGSLRNQ-IGLVQQD-NILFSDTVKENILL------GRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLE-SESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENG---HIVETGTHRELIAKQ----------------
General information:
TITO was launched using:
RESULT:
Template:
2ONJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87743 for 1698 contacts (-51.7/contact) +
2D Compatibility (PS) -23401 + (NN) -10923 + (LL) 2704
1D Compatibility (HY) -14400 + (ID) 3950
Total energy: -137713.0 ( -81.10 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_2ONJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ONJ-query.scw
PDB file :
Tito_Scwrl_2ONJ.pdb
: