Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILTAMQDAIGRTPIFKFTRKDYPIPLKSAIYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKITSTTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPL-QFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGMAKYLKERIPNIRLI--GVEPEGS-----ILNGGE--PGPHEIEGIGVEFIPPFFANLD---IDRFETISDEEGFSYTRKLAKKNGLLVGSSSGAAFAAALK-EVQRLPEGSQVLTIFPDMADRYLSKGIYS |
1FCJ Chain:B ((11-304)) | ---------IGHTPLVRLNRIG-----NGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIP---GNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGER-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76204 for 2477 contacts (-30.8/contact) +
2D Compatibility (PS) -31252 + (NN) -15876 + (LL) 1896
1D Compatibility (HY) -18000 + (ID) 5850
Total energy: -145286.0 ( -58.65 by residue)
QMean score : 0.534
|
|
|