Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKGFRAVKEFLSEQLEN-IDL--NYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILN--------QKTPLLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL
4ZZ9 Chain:B ((59-244))
-----------------------------------------------------FSTGIQNVSKFGNGSYSGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQN--KTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIKSA
General information:
TITO was launched using:
RESULT:
Template:
4ZZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82756 for 1322 contacts (-62.6/contact) +
2D Compatibility (PS) -18453 + (NN) -4969 + (LL) 4728
1D Compatibility (HY) -13600 + (ID) 3350
Total energy: -118400.0 ( -89.56 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_4ZZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZZ9-query.scw
PDB file :
Tito_Scwrl_4ZZ9.pdb
: