Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALLEIIHYPSKILRTISKEVVSFDSKLHQQLDDMHETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKWIETKGSIM-YREGCLSVPGFYEEVERFEKVKIEYQNRFAEVKILEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELQKKQKHK
3M6R Chain:B ((1-169))
---MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDMIGLSAPQVGLNVQLMVFNPAGEPG-EGKEIVL--VNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEK
General information:
TITO was launched using:
RESULT:
Template:
3M6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71892 for 1266 contacts (-56.8/contact) +
2D Compatibility (PS) -18119 + (NN) -5679 + (LL) 1028
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -112362.0 ( -88.75 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_3M6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M6R-query.scw
PDB file :
Tito_Scwrl_3M6R.pdb
: