Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSD-VDTFIFPSMGTLETTANLLAGTSF--GFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQ---VTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGDET--LVRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG |
3TAO Chain:A ((3-256)) | -RKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHL---DVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130921 for 2152 contacts (-60.8/contact) +
2D Compatibility (PS) -26439 + (NN) -7291 + (LL) 380
1D Compatibility (HY) -16000 + (ID) 4050
Total energy: -184321.0 ( -85.65 by residue)
QMean score : 0.548
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