Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRFDNVSKKYSDDKTAAVNNVTLDIKDGEFFVFIGPSGCGKTTTLKMINRLIPLTTGTIYINEKRISDYDIH-ELRWDIGYVLQQIALFPHMTIEENIAIVPELKK-WSKEKIHDRITELLDSVGLDPESYRHRKPAELSGGEQQRVGVVRALAADPGIILMDEPFSALDPISRQRLQQDISALQKKIKKTIVFVTHDMQEALALGDRICVMQGGEIVQVATPQEIMKNPENDFVKDFLASGHAFNTPILEANFTVNDLIEADLFYSYQTSDGTLGISSTEPVENLVRRIAEEQSIPVTDEAGNYIGTVSNKHVMQFLARHLESSGELV
4P33 Chain:B ((7-226))-----NLAKAYKGRRV--VEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHI--EHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRDS-GLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4P33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119327 for 1718 contacts (-69.5/contact) +
2D Compatibility (PS) -24093 + (NN) -10259 + (LL) 6936
1D Compatibility (HY) -20000 + (ID) 3700
Total energy: -170443.0 ( -99.21 by residue)
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_4P33.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P33-query.scw
PDB file : Tito_Scwrl_4P33.pdb: