Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMYAKNNTSGKDMLSLLEWNKEELTDIIKLAVAMKTNPAHYSHILSGKILGMIFDKPSTRTRVSFEAGILQLGGQAIVMSSKELQIGRGEPIKDTAHVMSEYIDAIMIRTFSHEKVEELAYHAEIPIINGLTDLHHPCQALADLMTIYEWKDQLEG-IKLAYIGDGNNVCHSLLLAGAMVGIDIRLAMPKGYEVDETILAKAENLAKQSGGKIFVTEDSKLAVTDADFIYTDVWTSMGQEDENAKRLADFGEKYQVNAELVSGAKPDYHFLHCLPAHREEEVTTEIIDGIHSVIYQQAGNRLHAQKALLAAILEAK
3TPF Chain:A ((2-304))----------MKHFLTLRDFSKEEILSLVNHASELKKEP---KKLLQDKTLAMIFEKNSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHETLLEFARYSKAPVINALSELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEF-EGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEKHADVIFEEARNRLYVVKALLCFLDNQR


General information:
TITO was launched using:
RESULT:

Template: 3TPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -223755 for 2631 contacts (-85.0/contact) +
2D Compatibility (PS) -33067 + (NN) -18945 + (LL) 740
1D Compatibility (HY) -26800 + (ID) 6350
Total energy: -308177.0 ( -117.13 by residue)
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_3TPF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TPF-query.scw
PDB file : Tito_Scwrl_3TPF.pdb: