Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLQGKVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKAGVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYITGQTLSVDGGMVM
4BNY Chain:A ((23-268))MSLQGKVALVTGASRGIGQAIALELGRLGA-VVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNA---------RMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM


General information:
TITO was launched using:
RESULT:

Template: 4BNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137416 for 2034 contacts (-67.6/contact) +
2D Compatibility (PS) -25365 + (NN) -5381 + (LL) 508
1D Compatibility (HY) -20000 + (ID) 6150
Total energy: -193804.0 ( -95.28 by residue)
QMean score : 0.596

(partial model without unconserved sides chains):
PDB file : Tito_4BNY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BNY-query.scw
PDB file : Tito_Scwrl_4BNY.pdb: