Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVRDVNFSYNGTD--AILKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPNSGDVLLEGKSIFEWKAKEFAQNVAIVHQSNVLPNELMVKELLYFGRLPYK--NWRMTRTKE--DDLAVERALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILLLDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALMYSDHLIVMKNGEVVAKGEPEELLTTDLIAETYGVVADVLNDANNGKYIVPQRRKEF
4AYT Chain:A ((342-567))LEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGV-LLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRL--MDGRTVLVIAHRLS-TIKNANMVAVLDQGKITEYGKHEE-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101378 for 1714 contacts (-59.1/contact) +
2D Compatibility (PS) -23972 + (NN) -9143 + (LL) 2572
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -149071.0 ( -86.97 by residue)
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_4AYT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AYT-query.scw
PDB file : Tito_Scwrl_4AYT.pdb: