Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITIKNIQKSFGENKVLKGIDLTVKKGEVVTILGPSGSGKTTFLRCLNLLERPENGEISMHDQIINCKKPSKKEVLQLRKNTAMVFQ--QYNLFSHKTVIQNVMEG---LTVARKIPKKIAHEIAERELTKVGLADKLSAYPSQLSGGQKQRVGIARALAINPDVILFDEPTAALDPELVGEVLEVMLEI-ARAGATMIVVTHEMEFAKRVADQVVFMDGGLIVEQGTPDEVFNHTKEERTKRFLHRVSADYLYEIKEVKKERVI
4MKI Chain:B ((27-236))
----------------LKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDI---RKQVGLVFQYPEYQLF-EETVFKDIAFGPSNLGLSEEEVKERVYEAMEIVGISKELADK---SPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVF--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106383 for 1543 contacts (-68.9/contact) +
2D Compatibility (PS) -22345 + (NN) -10084 + (LL) 5032
1D Compatibility (HY) -14000 + (ID) 4250
Total energy: -152030.0 ( -98.53 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_4MKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKI-query.scw
PDB file :
Tito_Scwrl_4MKI.pdb
: