Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTDLRVSAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEPASFLALLEAVK
2Y63 Chain:A ((6-251))
--QPIAAANWKCNGTTASIEKLVQVFNEHTISHD-VQCVVAPTFVHIPLVQAKLRNPKYVISAQNA-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKP-EFRDIIDATR
General information:
TITO was launched using:
RESULT:
Template:
2Y63.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100545 for 2107 contacts (-47.7/contact) +
2D Compatibility (PS) -27028 + (NN) -13250 + (LL) 688
1D Compatibility (HY) -17200 + (ID) 5250
Total energy: -162585.0 ( -77.16 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2Y63.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y63-query.scw
PDB file :
Tito_Scwrl_2Y63.pdb
: