Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKTIYDITIVGGGPVGLFAAFYAGLRGVSVKIIESLSELGGQPAILYPEKKIYDIPGYP-VITGRELIDKHIEQLERFKDSIEICLKEEVLSFEKVDDVFTIQTDKDQHLSRAIVFACGNGAFAPRLLGLENEENYADNNLFYNVTKLE-QFAGKHVVICGGGDSAVDWANELDKIAASVAIVHRRDAFRAH----EHSVDILKASGVRILTPYVPIGLNGDSQRVSSLVVQKVK-GDEVIELPLDNLIVSFGFSTSNKNLRYWNLDYKRSSINVSS-----LFETTQEGVYAIGDAANYPGKVELIATGYGEAPVAINQAINYIYPDRDNRVVHSTSLIK |
| 1TRB Chain:A ((2-316)) | -TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTE---VENWPGDPNDLTGPLLMERMHEHATKFETE--I-IFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGA---SARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEG-QLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYR--QAITSAGTGCMAALDAERYLDGL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212462 for 2703 contacts (-78.6/contact) +
2D Compatibility (PS) -32662 + (NN) -8777 + (LL) 2376
1D Compatibility (HY) -8000 + (ID) 3900
Total energy: -263425.0 ( -97.46 by residue)
QMean score : 0.467
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