Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEHHIPKNSIITVAGTVGVGKSTLTKTLAKRLGFKTSLEE-------VDHNPYLEKFYHDFERWSFHLQIYFLAERFKEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTSLFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWEEMHTRYENWISGFNACPVLKLRIEDYDLLNDENSIENIVDQIASVIHDNQKK |
| 1J90 Chain:A ((18-212)) | ------TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTN-KKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIH-VQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLNLE--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25078 for 1420 contacts (-17.7/contact) +
2D Compatibility (PS) -20313 + (NN) -4024 + (LL) 2460
1D Compatibility (HY) -7600 + (ID) 2150
Total energy: -56705.0 ( -39.93 by residue)
QMean score : 0.478
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