Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAISTFAPQKNVQLELE
4J6W Chain:E ((6-69))----SLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNT-VSQMVYKHAISTVVPSRPVR----


General information:
TITO was launched using:
RESULT:

Template: 4J6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 225 -41897 -186.21 -654.64
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain E : 0.84

3D Compatibility (PKB) : -186.21
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_4J6W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J6W-query.scw
PDB file : Tito_Scwrl_4J6W.pdb: