Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKRRTQEERSAATREALITGARKLWGLRGYAEVGTPEIATEAGVTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPADAIRAAVDAWLEVS-GDPEVRQLILLDAPVVLGWAGFRDV-AQRYSLGMTEQLITEAIRAGQLAR-QPVRPLAQVLIGALDEAAMFIATADDPKRARRETRQVLRRLIDGMLNG
3ANP Chain:C ((3-194))
-------REYQKKRRRERIFRAAMELFRNRGFQETTATEIAKAAHVSRGTFFNYYPYKEAVLLDYGSQLLAGLREEVRRLLAQ--GREPVEVLRHLFRVLAEGTAREKDLLLPMFYELLN-PDPVRARAAFEALPLGDLIAEILKPLREQGVLRQDFSLERMGRTLADLYFLSALRWAAYTPGRDLAEELEKNLRLLLEGML--
General information:
TITO was launched using:
RESULT:
Template:
3ANP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77330 for 1351 contacts (-57.2/contact) +
2D Compatibility (PS) -20917 + (NN) -11088 + (LL) 572
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -118563.0 ( -87.76 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_3ANP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ANP-query.scw
PDB file :
Tito_Scwrl_3ANP.pdb
: