Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNA-VGAGTGIVID-PNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGG--GVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNN-----------GNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 3STJ Chain:A ((12-333)) | ------------------------------------------------LPSLAPMLEKVLPAVVSVRVEGT--QPFEGLGSGVIINASKGYVLTNNHVINQAQKISI-QLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFG--LGQTATSGIVSALGRSGLNLE------GL-ENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGG-GSVGIGFAIPSNMARTLAQQLIDFGEIK------RGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPL-EVEVTLDT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148630 for 2451 contacts (-60.6/contact) +
2D Compatibility (PS) -31556 + (NN) -17946 + (LL) 4196
1D Compatibility (HY) -17200 + (ID) 4450
Total energy: -215586.0 ( -87.96 by residue)
QMean score : 0.470
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