Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLR------GDDVVGGLGDRARFAQADVTDEAAVSNALELADS-LGPVRVVVNCAGTGNAIRVLSRDGVFPLAAFRKIVDINLVGTFNVLRLGAERIAKTEPIGEERGVIINTASVAAFDGQ-IGQAAYSASKGGVVGMTLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPH-P-SRLGNPDEYGALVLHIIEN--PMLNGEVIRLDGAIRMAPR |
| 4WEC Chain:B ((32-273)) | ------VAVITGGASGIGLATGRRLRAEGATVVVGDIDPTTGKAAADELEGL-----FVPVDVSEQEAVDNLFDTAASTFGRVDIAFNNAGISPPEDDLIENTDLP--AWQRVQDINLKSVYLSCRAALRHMV---PAG--KGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQYARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHIPLGRFAEPEELAAAVAFLASDDASFITGSTFLVDGGISSA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144607 for 1971 contacts (-73.4/contact) +
2D Compatibility (PS) -23874 + (NN) 623 + (LL) 1260
1D Compatibility (HY) -12000 + (ID) 4450
Total energy: -183048.0 ( -92.87 by residue)
QMean score : 0.467
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