Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNL-HFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMP--EAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELA--AQGDFDKVVVNRRLESACAELVSLLVGTAPGSP
2QOR Chain:A ((9-197))
-----------------MARIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYA-N-NFYGTLKSEYDLAVGEGKICLFEMNINGVKQLKESKHIQDGIYIFVKPPSIDILLGRLKNRNTEKPEEINKRMQELTREMDEADKVGFNYFIVNDDLARTYAELREYLLGS-----
General information:
TITO was launched using:
RESULT:
Template:
2QOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75965 for 1352 contacts (-56.2/contact) +
2D Compatibility (PS) -20953 + (NN) -11244 + (LL) -336
1D Compatibility (HY) -14400 + (ID) 2950
Total energy: -125848.0 ( -93.08 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2QOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QOR-query.scw
PDB file :
Tito_Scwrl_2QOR.pdb
: