Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRHFLRDDDLSPAEQAEVLELAAELKKDPVSRRPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAV-VVDSGSTQLGRD-ETLQDTAKVLSRYVDAIVWR--TFGQERLDAMASVATVPVINALSD-EFHPCQVLADLQTIAERKGALRGLRLSYFGD-GANNMAHSLLLG-GVTAGIHVTVAAPEGF-LPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS |
| 3LXM Chain:A ((32-329)) | --KHIISINDLSRDELELVLRTAASLKKTP--QPELLKHKVIASCFFEASTRTRLSFETSIHRLGASVVGFSD---------GETLADTMSVISTYVDAIVMRHPQEGASRLAAQFS-GNVPIVNAGDGANQHPTQTLLDLFTIQETQGRLDNINIAMVGDLKYGRTVHSLTQALAKFNGNHFFFIAPDALAMPAYILQMLEEKEIE-----YSLHESLEEVVPELDILY---MTR---------YANVKAQFILRSSDLTGARDNLKVLHPLP--RIDEITTDVDKTPYAYYFQQAGNGIFARQALLALVL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155602 for 2215 contacts (-70.2/contact) +
2D Compatibility (PS) -29963 + (NN) -16080 + (LL) 1084
1D Compatibility (HY) -16400 + (ID) 5050
Total energy: -222011.0 ( -100.23 by residue)
QMean score : 0.474
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