Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAE--RLWARAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAP-GSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLPGLIDTAILTSTRQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
1IPF Chain:A ((19-205)) | -------GIGYGIVEELASL----GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQ-ELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVF-ISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQ-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57537 for 1385 contacts (-41.5/contact) +
2D Compatibility (PS) -19711 + (NN) -8398 + (LL) 7140
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -95506.0 ( -68.96 by residue)
QMean score : 0.305
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