Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALSAEGSSGGSRGGSPKAEAASVPSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRS-SVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGAR----GPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQI |
4YI7 Chain:A ((16-358)) | -----------------------RANIQQALNHITKNIHLTQAQMEDVMRSIMQGEATEAQIGALMMGLRMKGESIDEITAAARVMRELAIKIDVSD-IQYLVDIVGTGGD--NLFNVSTASSFVIAAAGATIAKHGNR-------SSDLLEQAGINLDLDMQQTERCIREMGVGFLFA------MKYAVGPRRELGIRSIFNLLGPLTNPAGVKRFVIGVFSDELCRPIAEVMKQLGAEHVMVVHSKDGLDEISLASQTYIAELKNGEVTEWVLNPEDVNIPSQTLSGLIVEDSNASLKLIKDALGRKKSDIGEKAANMIALNAGAGIYVSGLA-------TSYKQGVALAHDIIYGGQALEKMSILSEFTKA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251877 for 2906 contacts (-86.7/contact) +
2D Compatibility (PS) -36194 + (NN) -26687 + (LL) 1524
1D Compatibility (HY) -22400 + (ID) 5400
Total energy: -341034.0 ( -117.36 by residue)
QMean score : 0.504
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