Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIADEIQSGLACTGYPFACDHGGVLPDIYLLGKTLGGGAVPLSAMVADREIFGVVHPGEHGSTFGGNPLAAAIGTPVVSMVVWGECQARSAKLGAHLHQRLADLIGDGAVALRGLG--WWADVDIE--RALAIGTDMSMRLADRGVLLKDTYGAALRFAPPLVITAQEIDCAVRRFADALWEAGS
2EO5 Chain:A ((249-403))
LVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDL--DFK------TFGGNALACAIGSKVIDIV--KDLLPHVNEIGKIFAEELQGLADD----VRGIGLAWGLEYNEKKVRDRIIGESFK-----RGLLLLPAGRSAIRVIPPLVISEEE-----------------
General information:
TITO was launched using:
RESULT:
Template:
2EO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73018 for 917 contacts (-79.6/contact) +
2D Compatibility (PS) -15322 + (NN) -4963 + (LL) 2248
1D Compatibility (HY) -12400 + (ID) 2700
Total energy: -106155.0 ( -115.76 by residue)
QMean score : 0.104
(partial model without unconserved sides chains):
PDB file :
Tito_2EO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EO5-query.scw
PDB file :
Tito_Scwrl_2EO5.pdb
: