Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLRLVSPIKAFADGIVAVAIAVVLMFGLANTPRAVAADERLQF-TATTL--SGAPFDGASLQGKPAVLWFWTPWCPFCNA-EAPSLSQVAAANP--AVTFVGIATR------ADVGAMQSFVSKYNLNFTNLNDADGV-----IWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALTS
3EYT Chain:A ((2-151))
-------------------------------------NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHH--FGDVSELLLGAEIATLL-
General information:
TITO was launched using:
RESULT:
Template:
3EYT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82945 for 958 contacts (-86.6/contact) +
2D Compatibility (PS) -14473 + (NN) -9585 + (LL) 3532
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -112171.0 ( -117.09 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_3EYT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EYT-query.scw
PDB file :
Tito_Scwrl_3EYT.pdb
: