Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGESGAAAAPSITLNDEHTMPVLGLGV---AELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAI----AASGVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAP-----------PVGKY----VD---AWGGMIQSRGEGHARSIGVSNFTAENIENLID---LTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPLALGR-----------LLDNPTVTSIASEYVKTPAQVLLRWNLQLGNAVVVRSARPERIASNFDVFDFELAAEHMDALGGLNDGTRVREDPLTYAGT |
3GUG Chain:A ((7-304)) | -----------CVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKY-KPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVR----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -143098 for 2148 contacts (-66.6/contact) +
2D Compatibility (PS) -27950 + (NN) -9384 + (LL) 1144
1D Compatibility (HY) -22000 + (ID) 5350
Total energy: -206638.0 ( -96.20 by residue)
QMean score : 0.471
|
|
|