Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMR-PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEP-IQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVC----GVMAG-RRVDEVADNV--FAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTAD-----------RDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 3DOD Chain:A ((25-443)) | ---------------------------------ENPLIIESGTGIKVKDI-NGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIA-HST--LL--GMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKP------EKQKFIAMK----------------------------SYKAPIPYVYRSESGD--PDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHA-LP-HVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-DVIAFLPPLASTAEELSEMVAIMKQAIHEV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254441 for 3171 contacts (-80.2/contact) +
2D Compatibility (PS) -41316 + (NN) -27986 + (LL) 3856
1D Compatibility (HY) -10800 + (ID) 4450
Total energy: -335137.0 ( -105.69 by residue)
QMean score : 0.480
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