Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDALPEAHGLLG--ASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELAGWVRAGEWKKSVGAAQFGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYHSHSPK-PHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFEREPLSP----DSPLLRLPNVVATPHIGSATEETREAMARCAVDNLLAALAGARPLNLVNPSAWARRRGA |
| 3K5P Chain:A ((17-307)) | --NVLLLEGISQTAVEYFKSSGYTNVTHLPKALDKADLIKAISSAH-IIGIRSRTQLTEEIFAAANRLIAVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSR---EVRGKTLGIVGYGNIGSQVGNLAE-SLGMTVRYYDTSDKLQYGNVKPAAS---LDELLKTSDVVSLHVP-----SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162535 for 2182 contacts (-74.5/contact) +
2D Compatibility (PS) -30103 + (NN) -12718 + (LL) 3432
1D Compatibility (HY) -15200 + (ID) 4900
Total energy: -222024.0 ( -101.75 by residue)
QMean score : 0.447
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