Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGIPEYLAQVEPALLDTLALGQVLE-MSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG |
4COE Chain:B ((2-44)) | --------------------------------------------------------------------------QITLWQRPLVTIKIG-------GQLKEALLDTGADDTVLEEMSLPGRWKP------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4COE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1811 for 154 contacts (11.8/contact) +
2D Compatibility (PS) -3919 + (NN) 3468 + (LL) 9268
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: 5928.0 ( 38.49 by residue)
QMean score : 0.031
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