Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLKDKVIIITGGCQGLGRAMGEYLAGKGARLALVDLNRERLDEAVAACKAAGGDARAYVCNVADEEQVTHMVAQVASDFG-AINGLVNNAGILRDGLTIKVKDGQLSKMSLAQWQSVIDVNLTGVFLCTREVAAKMIELKNEGAIVNISSI-SRAGNMGQANYSAAKAGVAADTVVWAKELARYGIRVAGVAPGFIETEMTAGMKPEALEKMTAGIPLKRMGKPVEIAHSVAYIFEND--YYTGRVLELDGGLRL |
| 4CQM Chain:H ((8-259)) | -RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLG----NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--------LLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149500 for 2107 contacts (-71.0/contact) +
2D Compatibility (PS) -25709 + (NN) -5893 + (LL) 876
1D Compatibility (HY) -16800 + (ID) 4650
Total energy: -201676.0 ( -95.72 by residue)
QMean score : 0.557
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