Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDLTDDVALMRPVIDALRASGCDPDRVLVRVGLPPGGLPAGRFPHSAQNLFWKAAADECGEEHVGLHLAEHLPAFHGLLLEYLFLSSDTFGAGLRHSLRYVRLLSDTLQAQLEVEGERAVLSLGESPAINRHFPEMLAGAVIRLFGALTEGEFKPLEVQLMNETGAPMERYRAVYGCPTILGMPRYALVFDAAVLDKPSRHAAPELLRMHESLARRQLAEVERLD--LVRQVRELIGELLVDGGATLEQVAARLGMPARRLRERLAMAGVRFNDLVTDYRCRLAKELLLKTDERIEVIVERTGFSEPSTFYRAFKRWVGETPVEFRRRGQQGRG |
3GBG Chain:A ((4-273)) | -----------KKSFQTNVYRMSKFDTYIFNNLYIN---------------DYKMFWIDSGIAKLIDKNCLVSYEI--NSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFRE--------------------------------------------INYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDI-TRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73568 for 1967 contacts (-37.4/contact) +
2D Compatibility (PS) -27318 + (NN) -8623 + (LL) 4368
1D Compatibility (HY) -8800 + (ID) 1500
Total energy: -115441.0 ( -58.69 by residue)
QMean score : 0.372
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