Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKN--YNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
| 1FJ9 Chain:B ((11-327)) | ---VTLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLWGIAGS--------KKLDVLSNDLVINVLKSSFATCVLVSEE-DKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYR-----KNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFDPAITEYIQR----KKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPK--GKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTEL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164712 for 2624 contacts (-62.8/contact) +
2D Compatibility (PS) -33354 + (NN) -18107 + (LL) 1612
1D Compatibility (HY) -30000 + (ID) 6350
Total energy: -250911.0 ( -95.62 by residue)
QMean score : 0.499
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