Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGCVFCKKLEPVATAKEDAGLEGDFRSYGAADHYGPDPTKARPASSFAHIPNYSNFSSQAINPGFLDSGTIRGVSGIGVTLFIALYDYEARTEDDLTFTKGEKFHILNNTEGDWWEARSLSSGKTGCIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVKHYKIRKLDMGGYYITTRVQFNSVQELVQHYMEVNDGLCNLLIAPCTIMKPQTLGLAKDAWEISRSSITLERRLGTGCFGDVWLGTWNGS-TKVAVKTLKPGTMS--PKAFLEEAQVMKLLRHDKLVQLYAVVSE-EPIYIVTEFMCHGSLLDFLKNPEG-----QDLRLPQLVDMAAQVAEGMAYMERMNYIHRDLRAANILVG---ERLACKIADFGLARLIKDDEYNPCQG-SKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELITKGRIPYPGMNKREVLEQVEQGYHMPCPPGCPASLYEAMEQTWRLDPEERPTFEYLQSFLEDYFTSAEPQYQPGDQT |
| 2YFX Chain:A ((15-302)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGKTSSI-SDLKEVPRKNITLIRGLG--AFGEVYEGQV---PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR------GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146754 for 2052 contacts (-71.5/contact) +
2D Compatibility (PS) -27959 + (NN) -14921 + (LL) 12708
1D Compatibility (HY) -22000 + (ID) 5000
Total energy: -203926.0 ( -99.38 by residue)
QMean score : 0.283
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