Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLRFSSKITAPTMTLDCANASNVQAVNRSATKEMTFLLPEPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRP-DDGSITGPC-ESDGDKGRGGIKG-GFVHQRMASKIGRWYSRTMSKTERMGMELYVKYDGDPWTDSDAL-APSGVMVSMKEPGWYSFGFEIK----DKKCDVPCIGIEMVHDGGKK--TWHSAATAIYCLMGSGQLLWDTVTGVDMAL |
| 2HTQ Chain:A ((2-385)) | -----------------------------------------------------------------------------YMNNTEAICDAKGFAPFSKDNGIRIGS---RGHIFVIREPFVSCSPIECRTFFLTQGSLLNDKHSNGTVKDRSPFRTLMSVEVGQSPNVYQARFEAVAWSATACHDGKKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVMTDGPANRQAQYRIYKANQGRIIGQTDISFNGGHIEECSC-YPNDGKVECVCRDGWTGTNRPVLVIS-PDLSYRVGYLCAGIPSDTPRGEDTQF-TGSCTSPMGNQG-YGVKGFGFRQGT-----DVWMGRTISRTSRSGFEILRIKNG--WTQTSKEQIRKQVVVDNLNWSGYSGSFTLPVELSGKDCLVPCFWVEMIRGKPEEKTIWTSSSSIVMCGVDYEVADWSWHDGAILPF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HTQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -111054 for 3491 contacts (-31.8/contact) +
2D Compatibility (PS) -39077 + (NN) -8310 + (LL) 6648
1D Compatibility (HY) -21600 + (ID) 6600
Total energy: -179993.0 ( -51.56 by residue)
QMean score : 0.487
|
|
|