Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLHVRGLGLPGCLALAALASLVHSQHVFLAPQQALSLLQRVRRANSGFLEELRKGNLERECVEEQCSYEEAFEALESPQDTDVFWAKYTVCDSVRKPRETFMDCLEGRCAMDLGLNYHGNVSVTHTGIECQLWRSRYPHRPDINSTTHPGADLKENFCRNPDSSTSGPWCYTTDPTVRREECSIPVCGQEGRTTVKMTPRSRGSKENLSPPLGECLLERGRLYQGNLAVTTLGSPCLAWDSLPTKTLSKYQNFDPEVKLVQNFCRNPDRDEEGAWCFVAQQPGFEYCSLNYCDEAVGEENHDGDESIAGRTTDAEFHTFFDERTFGLGEADCGLRPLFEKKSLTDKTEKELLDSYIDGRIVEGWDAEKGIAPWQVMLFRKS-PQELLCGASLISDRWVLTAAHCILYPPWDKNFTENDLLVRIGKHSRTRYERNVEKISMLEKIYIHPRYNWRENLDRDIALLKLKKPVPFSDYIHPVCLPDKQTVTSLLQAGYKGRVTGWGNLRETWTTNINEIQPSVLQVVNLPIVERPVCKAST-RIRITDNMFCAGFKVNDTKRGDACEGDSGGPFVMKSPYNHRWYQMGIVSWGEGCDRNGKYGFYTHVFRLKRWMQKVIDQHR |
| 3BG8 Chain:A ((1-237)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFY-----GVESPKILRVYSGILNQSEIKEDTSFF-GVQEIIIHDQYKMA-ESGYDIALLKLETTVNYTDSQRPISLPSKGER---NVIYTDCWVTGWGYRKLRDK------IQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGK---DACKGDSGGPLSCKH--NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161240 for 2006 contacts (-80.4/contact) +
2D Compatibility (PS) -25459 + (NN) -9902 + (LL) 19488
1D Compatibility (HY) -11600 + (ID) 4200
Total energy: -192913.0 ( -96.17 by residue)
QMean score : 0.243
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