Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLLLLTLPLLSSLVHAAPSLAMPREGIVGGQEASGNKWPWQVSLRVNDTYWMHFCGGSLIHPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYY---HDHLLTVSQIISHPDFYI--AQDGADIALLKLTNPVNITSNVHTVSLPPASE---TFPSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLCDLKYHKGLNTGDNVHIVRDDMLCAGN--EGHDSCQGDSGGPLVCKVEDTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIYRYVPKYF |
| 2WPH Chain:S ((1-233)) | ----------------------------VVGGEDAKPGQFPWQVVLNGKV---DAFCGGSIVNEKWIVTAAHCVE----TGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGS-GYVSGWGRVFHKGR--SALVLQYLRVPLVDRATCLRSTKF---------TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTK--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -167369 for 1937 contacts (-86.4/contact) +
2D Compatibility (PS) -24373 + (NN) -4940 + (LL) 3160
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -213172.0 ( -110.05 by residue)
QMean score : 0.369
|
|
|