Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVWLASLFLCALVANSEGGSELEASDESNCGCQNGGVCVSYKYFSSIRRCSCPKKFKGEHCEIDTSKTCYHGNGQSYRGKANTDTKGRPCLAWNSPAVLQQTYNAHRSDALSLGLGKHNYCRNPDNQRRPWCYVQIGLKQFVQECMVQDCSLSKKPSSTVDQQGFQCGQKALRPRFKIVGGEFTVVENQPWFAAIYLKNKGGSPPSFKCGGSLISPCWVASATHCFVNQPKKEEYVVYLGQSKRNSYNPGEMKFEVEQLILHEDFSDETLAFHNDIALLKIRTSTGQCAQPSRTIQTICLPPRFGDAPFGSDCEITGFGQESATDYFYPKDLKMSVVKIISHEQCKQPHYYGSEINYKMLCAADPEWKTDSCSGDSGGPLICNI-DGRPTLSGIVSWG--SGCAEKNKPGVYTRVSYFLNWIQSHIGEENGLAF |
| 1BRU Chain:P ((1-240)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVGGEDARPNSWPWQVSLQYDSSG--QWRHTCGGTLVDQSWVLTAAHCISS---SRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASP----VSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNG-ASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGD-GIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIAN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144617 for 2016 contacts (-71.7/contact) +
2D Compatibility (PS) -25688 + (NN) -13240 + (LL) 8884
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -193961.0 ( -96.21 by residue)
QMean score : 0.268
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