Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | AHNIVLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLALQAKLQEQVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKDFFPLDEDGNVIPSEKDFVDTWTAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIECHPYLTQEKLIQYCNSKGIVVTAYSPLGSPDRPWAKPEDPSILEDPRIKAIADKYNKTTAQVLIRFPIQRNLIVIPKSVTPERIAENFQVFDFELDKEDMNTLLSYNRDWRACALVSCASHRDYPFHEEF |
1MZR Chain:A ((26-288)) | -TVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKN----ASVNREELFITTKLWNDDH--KRPREALLDSLKKLQLDYIDLYLMHWPVPA------------------IDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETG--VTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGG--------KGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185484 for 2284 contacts (-81.2/contact) +
2D Compatibility (PS) -28205 + (NN) -12375 + (LL) 2208
1D Compatibility (HY) -22800 + (ID) 5500
Total energy: -252156.0 ( -110.40 by residue)
QMean score : 0.620
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