Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKTFILIMNMENEKAHITKVKLPIFLDYQSTTKVDPRVLEMMIPYFS-EFSNAHSRSHSFGWAAEEVVEKARRHIADLVNADSKEIIFTSGATESNNMAIKGVAHFY-------KNKGDHIITVCTEHKCVLDSCRHLE-NEGFKVTYLPVKR-NGIIDLSKLEEAITDRTILVSVMMVNNEIGVIQPVKEIGAICRRH----------NVFFHTDAAQSFGKVPVDVNGMNIDLMSLTSHKVYGPMGIGALYVRRKSPRVRLTPLISGGGQERGMRSGTVPTPLAVGFGEAARIAKEEMKKEASKLEELRDILYNKIKEAFPDVVLNGDY---N-NRIPGNLNLSFPYV--EGESLIMAIKDLAVSSGSACTSASL-EPSYVIRSLNSGYDLEHSSIRFGLGRFTTKDEILYAADLIAKNVGRLREMSPLWEMVQEGIDLNTVKWDSH |
3A9Z Chain:A ((18-430)) | ----------------------RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSS-YVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEA-EFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGPV-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188638 for 3389 contacts (-55.7/contact) +
2D Compatibility (PS) -40607 + (NN) -18104 + (LL) 3976
1D Compatibility (HY) -26400 + (ID) 6050
Total energy: -275823.0 ( -81.39 by residue)
QMean score : 0.491
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