Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFIILAAGHGKRMNSGLPKVLHKIGNFSMLQHIIYNARQLNPENISVVANLPLIERLKCLED--IQLITQESTLGTGDAVKTAVRNMKELSDSNIIVVQYGDTPLIKNSTITQMVSCLEGKALVCLGFKTSN-KEYGRLIIENGSLREIVETQDDE-NSDEEFLANAGIMVAYAKNLRELVEKIECNGSTYEYYLTDIVSIAVKSNLNVGYVTT-DEEEATGINSRNDLAKAEFYFQENRRKFFTDSGVTLVAPETVFFSLDTQIGMDSIIYPYVFFGPGVRIGPGAKIGPFTKCEDTTIGDGAIVGNFVEAKA-----------------------------------SDIGTNTKIKHLSYIGNTEVGRESNIGAGTVVCNYDGKKKHRTNIGSNCFVGANSSLIAPLNVHDESVIAAGSIIVKDVPKKRLVITRRKQMVKKIK |
2V0H Chain:A ((7-447)) | SAVILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANEQVNWVLQTEQLGTAHAVQQAAPFFKD---NENIVVLYGDAPLITKETLEKLIEAKPENGIALLTVNLDNPTGYGRIIRENGNVVAIVEQKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTITRDVGENELVITRVAQRHIQGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278256 for 3141 contacts (-88.6/contact) +
2D Compatibility (PS) -43711 + (NN) -14949 + (LL) 72
1D Compatibility (HY) -24400 + (ID) 6950
Total energy: -368194.0 ( -117.22 by residue)
QMean score : 0.466
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