Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSLIQQFRD-FVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTETIQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
1KGS Chain:A ((2-224))
-NVRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKS--TKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLW-----VFSDVLRSHIKNLRKKVD--KGF--KKKIIHTVRGIGYVARD--
General information:
TITO was launched using:
RESULT:
Template:
1KGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144111 for 1651 contacts (-87.3/contact) +
2D Compatibility (PS) -24459 + (NN) -19424 + (LL) 1004
1D Compatibility (HY) -15600 + (ID) 3400
Total energy: -205990.0 ( -124.77 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_1KGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KGS-query.scw
PDB file :
Tito_Scwrl_1KGS.pdb
: