Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
1LWX Chain:B ((9-155))
-ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRAIIHGSDSVESANREIALWFKPEELLTEVKP-NPNLYE
General information:
TITO was launched using:
RESULT:
Template:
1LWX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71095 for 1104 contacts (-64.4/contact) +
2D Compatibility (PS) -15804 + (NN) -4662 + (LL) 308
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -109803.0 ( -99.46 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1LWX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LWX-query.scw
PDB file :
Tito_Scwrl_1LWX.pdb
: