Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAGSQHVD--ELHGTLNRFYC--NACHK----SYTKSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFK-GDNLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 4R8M Chain:B ((37-266)) | ------------ERCRRVICLVGAGISTSAGIPDFR---GLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALA-KELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83168 for 1524 contacts (-54.6/contact) +
2D Compatibility (PS) -21560 + (NN) -4857 + (LL) 2992
1D Compatibility (HY) -16000 + (ID) 3550
Total energy: -126143.0 ( -82.77 by residue)
QMean score : 0.425
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